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ISSN 2687-7945
Genome Sequencing
July 07, 2026 EDT

The complete genome sequences of 22 species of Micromeria (Lamiaceae, Lamiales)

Manuel Curto, Pamela Puppo, Christian Bräuchler, Ruth Jaén-Molina, Juli Caujapé-Castells, Pedro Luis Pérez de Paz, Harald Meimberg, Stacy Pirro,
https://doi.org/10.56179/001c.164576
biogenomes
Curto, Manuel, Pamela Puppo, Christian Bräuchler, et al. 2026. “The Complete Genome Sequences of 22 Species of Micromeria (Lamiaceae, Lamiales).” Biodiversity Genomes, July 7. https://doi.org/10.56179/001c.164576.
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Abstract

We present complete genome sequences of 22 species of Micromeria.

Methods

Tissues from single, wild-collected individuals were used for this study. DNA extraction was performed using the Qiagen DNEasy genomic extraction kit using the standard process. Paired-end sequencing libraries were constructed using the Illumina TruSeq kit according to the manufacturer’s instructions. The libraries were sequenced on an Illumina Hi-Seq platform in paired-end, 2 × 150bp format. The resulting fastq files were trimmed of adapter/primer sequences and low-quality regions with Trimmomatic v0.33 (Bolger et al. 2014). The trimmed sequence was assembled by SPAdes v3.15.4 (Bankevich et al. 2012) followed by a finishing step using Zanfona (Kieras et al. 2021).

Results and Data Availability

taxname accession
Micromeria benthamii JBWICF000000000
Micromeria densiflora JBWICE000000000
Micromeria ericifolia JBWICM000000000
Micromeria glomerata JBWICL000000000
Micromeria gomerensis JBWICG000000000
Micromeria helianthemifolia JBWICK000000000
Micromeria herpyllomorpha JBWICH000000000
Micromeria hierrensis JBWICI000000000
Micromeria hochreutineri JBXGFH000000000
Micromeria lachnophylla JBWIBY000000000
Micromeria lanata JBWIBZ000000000
Micromeria lasiophylla JBXGFL000000000
Micromeria lepida JBWICB000000000
Micromeria leucantha JBWICD000000000
Micromeria madeirensis JBWICJ000000000
Micromeria pedro-luisii JBXGEP000000000
Micromeria pineolens JBXGFJ000000000
Micromeria rivas-martinezii JBXGFG000000000
Micromeria tenensis JBXGFI000000000
Micromeria teneriffae JBXGEO000000000
Micromeria tenuis JBXGEN000000000
Micromeria tragothymus JBXGEM000000000

Funding

Funding was provided by Iridian Genomes, grant# IRGEN_RG_2021-1345 Genomic Studies of Eukaryotic Taxa.

Submitted: July 03, 2026 EDT

Revised: July 03, 2026 EDT

Accepted: July 03, 2026 EDT

References

Bankevich, Anton, Sergey Nurk, Dmitry Antipov, et al. 2012. “SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing.” Journal of Computational Biology.
Google Scholar
Bolger, Anthony M., Marc Lohse, and Bjoern Usadel. 2014. “Trimmomatic: A Flexible Trimmer for Illumina Sequence Data.” Bioinformatics 30 (15): 2114–20. https:/​/​doi.org/​10.1093/​bioinformatics/​btu170.
Google Scholar
Kieras, M., K. O’Neill, and S. Pirro. 2021. “Zanfona, a Genome Assembly Finishing Tool for Paired-End Illumina Reads.” https:/​/​github.com/​zanfona734/​zanfona.

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